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Recent Addition
New catalogue and services.

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APAF has recently added Difference Gel Electrophoresis (DIGE) to our available proteomics services. DIGE allows researchers to focus only on proteins of relevance whilst simultaneously removing gel to gel variation by the incorporation of an internal standard for every gel spot.
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MS Analysis of Intact Protein
The intact protein is analysed by either ESI-TOF MS or Linear MALDI-TOF MS. Generally, ESI-TOF MS is recommended as it is more accurate and requires less sample. Proteins are treated in a variety of ways depending on the sample and the MS method used. Once analysed the result is reported as a mass, plus or minus the experimental error.

Recommended for:
The accurate assignment of a proteins mass

Advantages:
  • Highly accurate mass information (accurate to 0.01% for ESI-TOF)
  • Can be used for basic glycoprotein analysis

Disadvantages:
  • Generally larger amounts of sample are required
  • The protein must be pure (>90%)
  • Ideally the sample is in solution, or solid format
  • Not all proteins are amenable to MS analysis
  • Highly glycosylated, or variably glycosylated, proteins can be difficult to analyse

For further details or advice on this APAF service please contact us at ms@proteome.org.au.

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