SWATHXtend - APAF developed software to extend peptide assay
libraries for SWATH mass spectrometry analysis.Use this to merge a local
IDA data with spectral libraries from external sources such as large
repositories. The script can be downloaded from BioConductor and can be
found at this link.
Read the article
Wu et al. SWATH mass spectrometry performance using extended peptide MS/MS assay libraries. Mol. Cell Proteomics mcp.M115.055558. First published online on May 9, 2016